Publications: Institute of Plant Breeding, Seed Science and Population Genetics

Title	Year	Literature Type	Authors
High-throughput platform for automated sorting and selection of single seeds based on time-domain nuclear magnetic resonance (TD-NMR) measurement of oil content Biosystems Engineering	2017	Journal contribution (peer reviewed)	Melchinger, A; Munder, S; Mauch, F.J.; Vilson, M; Böhm, J; Müller, J
High-Throughput Precision Phenotyping of the Oil Content of Single Seeds of Various Oilseed Crops Crop Science	2017	Journal contribution (peer reviewed)	Melchinger, A; Böhm, J; Utz, HF; Müller, J; Munder, S; Mauch, FJ
Low validation rate of quantitative trait loci for Gibberella ear rot resistance in European maize Theoretical and Applied Genetics	2017	Journal contribution (peer reviewed)	Brauner, P. C., A.E. Melchinger, T. A. Schrag, H. F. Utz, W. Schipprack, B. Kessel, M. Ouzunova, and T. Miedaner
Phenotypic and genotypic analyses of diversity and breeding progress in European triticale (×Triticosecale Wittmack) Plant Breeding	2017	Journal contribution (peer reviewed)	Losert, D., H. P. Maurer, J. J. Marulanda, and T. Würschum
Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar "Svilena" BMC Plant Biology	2016	Journal contribution (peer reviewed)	Seifert, F., Bössow, S., Kumlehn, J., Gnad, H., Scholten, S.
Choice of models for QTL mapping with multiple families and design of the training set for prediction of Fusarium resistance traits in maize. Theoretical and Applied Genetics	2016	Journal contribution	Han, S., H.F. Utz, W. Liu, T.A. Schrag, M. Stange, T. Würschum, T. Miedaner, E. Bauer, C.‑C. Schön, and A. Melchinger
Prediction of hybrid performance in maize with a ridge regression model employed to DN markers and mRNA transcription profiles BMC Genomics	2016	Journal contribution (peer reviewed)	Zenke-Philippi, C., Thiemann, A., Seifert, F., Schrag, T. A., Melchinger, A. E., Scholten, S., Frisch, M.
The Genetic Basis of Haploid Induction in Maize Identified ith a Novel Genome-Wide Association Method Genetics	2016	Journal contribution (peer reviewed)	Hu, H., Schrag, T. A., Peis, R., Unterseer, S., Schipprack, W., Chen, S., Lai, J., Yan, J., Prasanna, B. M., Nair, S. K., Chaikam, V., Rotarenco, .Shatskaya, O. A., Zavalishina, A., Scholten, S., Schön, C. C., Melchinger, A. E.
Biology, genetics, and management of ergot (Claviceps spp.) in rye, sorghum, and pearl millet Toxins	2015	Journal contribution (peer reviewed)	Miedaner, T., and H.H. Geiger
Genome-widemeta-analysis of maize heterosis reveals the potential role of additive gene expression at pericentromeric loci. BMC Plant Biol.	2014	Journal contribution (peer reviewed)	Thiemann, A., Fu, J. Seifert, F., Grant-Donwnton, T. T., Schrag, T. A., Pospisil, H., Frisch, M., Melchinger, A. E., Scholten, S.
Optimum allocation of test resources and comparison of breeding strategies for hybrid wheat Theoretical and Applied Genetics	2014	Journal contribution	Longin, C.F.H., X. Mi, Albrecht E. Melchinger, J.C.Reif, and T. Würschum
And baby makes three, genomic imprinting in plant embryos. PLOS Genet	2013	Journal contribution (peer reviewed)	Dickinson, H., Scholten, S.
RNA-based Prediction of Heterosis and Hybrid Performance. Diagnostics in Plant Breeding.	2013	Book chapter	Scholten, S., Thiemann, A.
Broad-spectrum resistance loci for three quantitatively inherited diseases in two winter wheat populations Molecular Breeding	2012	Journal contribution (peer reviewed)	Miedaner, T., P. Risser, S. Paillard, T. Schnurrbusch, B. Keller, L. Hartl, J. Holzapfel, V. Korzun, E. Ebmeyer and H.F. Utz
Diversity, spatial variation, and temporal dynamics of virulences in the German leaf rust (Puccinia recondita f. sp. secalis) population in winter rye European Journal of Plant Pathology	2012	Journal contribution (peer reviewed)	Miedaner, T., B. Klocke, K. Flath, H.H. Geiger, and W.E. Weber
Partial least squares regression, support vector machinge regression, and transcriptome bsed distances for prediction of maize hybrid performance with gene expression data. Theor Appl Genet.	2012	Journal contribution (peer reviewed)	Fu, J., Falke, K. C., Thiemann, A., Schrag, T. A., Melchinger, A. E., Scholten, S., Frisch, M.
Re-annotation of the maize oligonucleotide array. Maydica	2012	Journal contribution (peer reviewed)	Seifert, F., Thiemann, A., Popspisil, H., Scholten, S.
Colocalization of QTL for Gibberella ear rot resistance and low mycotoxin contamination in early European maize Crop Science	2011	Journal contribution	Martin M., T. Miedaner, B.S. Dhillon, U. Ufermann, B. Kessel, M. Ouzunova, W. Schipprack, and A.E. Melchinger
Diversity in genetic structure and chemotype composition of Fusarium graminearum sensu stricto populations causing wheat head blight in individual fields in Germany European Journal of Plant Pathology	2011	Journal contribution (peer reviewed)	Talas, F., H. Parzies, and T. Miedaner
Combined analysis of per se and testcross performance in rye (Secale cereale L.) introgression lines. Crop Science	2010	Journal contribution	Falke, K.C., Wilde, P., Wortmann, H., Müller, B.U., Möhring, J., Piepho, H.P., Miedaner, T.
Correlation of parental line gene expression profiles with heterosis of grain yield nd dry matter content. Theor App. Genet.	2010	Journal contribution (peer reviewed)	Thiemann, A., Fu, J., Schrag, T., Melchinger, A., Frisch, M. Scholten, S.
Genomic imprinting in plant embryos Epigenetics	2010	Book chapter	Scholten, S.
Heterosis in early seed development: A comparative study of F1 embryo and endosperm tissues six days after fertilization. Theor Appl Genet.	2010	Journal contribution (peer reviewed)	Jahnke, S., Sarholuz, B., Kühr, V., Thiemann, A., Gutiérrez-Marcos, J. F., Geiger, H. H. , Piepho, H.-P., Scholen, S.
Transcriptomebased distance measures for grouping of germplasm and perfomance prediction in hybrid breeding. Theor Appl Genet.	2010	Journal contribution (peer reviewed)	Frisch, M., Thiemann, A. Fu, J., Schrag, T. A., Scholten, S., Melchinger, A. E.
Epigenetic resetting of a gene imprinted in plant embryos. Current Biology	2009	Journal contribution (peer reviewed)	Jahnke, S., Scholten, S.
Heterosis in Plants: Manifestation in early seed development and prediction approaches to assist hybrid breeding. Chinese Science Bulletin	2009	Book chapter	Thiemann, A., Meyer, S., Scholten, S.
Optimum allocation of test resources and relative efficiency of alternative procedures of within-family selection in hybrid breeding Plant Breeding	2009	Journal contribution	Longin, C.F.H., H.P. Maurer, A.E. Melchinger, and M. Frisch
In vitro fertilization: analysis of early post-fertilization development using cytological and molecular techniques. Sex. Plant Reprod.	2008	Book chapter	Kranz, E., Scholten, S.
Single cell expression profiling: transcript- and protein analyses in isolated higher plant gametes and zygotes	2008	Book chapter	Scholten, S., Kranz, E.
Equivalent parental contribution to early plnt zygotic development. Current Biology	2007	Journal contribution (peer reviewed)	Meyer, S., Scholten, S.
Heterosis associated gene expression in maize embryos 6 days after fertilization exhibits additive, dominant and overdominant pattern. Plant Mol. Biol.	2007	Journal contribution (peer reviewed)	Meyer, S., Pospisil, H., Scholten, S.
Hybrid maize breeding with doubled haploids: III. Efficiency of early testing prior to doubled haploid production in two-stage selection for testcross performance.	2007	Journal contribution	Longin, C.F.H., Utz, H.F., J.C. Reif, T. Wegenast, W.Schipprack, and A.E. Melchinger
Epigenetic asymmetry of imprinted genes in plant gametes. Nature Genetics	2006	Journal contribution (peer reviewed)	Gutierrez-Marcos, J. F., Costa, L. M., Dal Pra, M., Scholten, S., Kranz, E., Perez, P., Dickinson, H. G.
Construction and screening of subtracted cDNA libraries from limited populations of plant cells: a comparative analysis of gene expression between maize egg cells nd central cells. Plant Journal	2005	Journal contribution (peer reviewed)	Lê, Q., Gutièrrez-Marcos, J. J., Costa, L. M., Meyer, S., Dickinson, H. G., Lörz, H., Kranz, E., Scholten, S.
Identification of genes that are up-or downregulated in the apical or basal cell of maize two celled embryos and monitoring their expression during zygote development by a cell manipulation- and PCR-based approach. Plant Cell Physiol.	2005	Journal contribution (peer reviewed)	Okamoto, T., Scholten, S., Lörz, H., Kranz, E.
Phytosulfokine gene regulation during maize (Zea mays L.) reproduktion. Journal of Experimental Botany	2005	Journal contribution (peer reviewed)	Lorbieke, R., Steffens, M., Tomm, J., Scholten, S., von Wiegen, P., Kranz, E., Wienand, U., Sauter, M.
Double Fertilization in vitro and Transgene Technology.	2004	Book chapter	Kranz, E., Hoshino, Y., Okamoto, T., Scholten, S.
Fertilization-induced changes in the microtubular architecture of maize egg cell and zygote - an immunocytochemical approach adapted to single cells Sex Plant Reprod	2004	Journal contribution (peer reviewed)	Hoshino, Y, Scholten, S., von Wiegen, P., Lörz, H., Kranz, E.
Paternal mRNA and protein synthesis coincides with male chromatin decondensation in maize zygotes Plant Journal	2002	Journal contribution (peer reviewed)	Scholten, S., Lörz, H., Kranz, E.
In vitro fertilization and expression of transgenes in gametes and zygotes.	2001	Book chapter	Scholten, S., Kranz, E.
Untersuchungen über Epistasie bei quantitativen Merkmalen des Maises (Zea mays L.)	1967	Doctoral thesis	Geiger, H.H.